Most likely your E-50 bearings are floating in the case haves when at temp.
Sand/deck the haves till your plastic gauge reads 0.0015'' to 0.0025'' 10mm from where the bearings sit with new bearings in the carters at room temp.
With the cases bolted.
Use the right sealer like yahambond
And assemble/load the cases warm 150/180f, toque and place in fridge to cool 1hr and re toque . (edited)